The MTI linksets support miRBase accession IDs, so we can select the miRBase ID column. The network attribute is the column that is used to identify the entities in the linkset and needs to contain one of the supported identifiers. The user network is the network you want to extend.
Install the CyTargetLinker app via the app manager (Apps -> App Manager -> Select CyTargetLinker -> Click ‘Install’).
Step 3: Built regulatory network in Cytoscape
In this tutorial, a step-by-step explanation is given on how to extend a list of microRNAs with predicted and validated microRNA-target interactions (MTIs). The visualization options allow biological interpretation of complex regulatory networks in a graphical way. Tutorial 1 | CyTargetLinker - Extend your biological networks in Cytoscape Home Documentation Tutorials Link sets Contact Tutorial 1 Extend a set of microRNAs with target informationĬyTargetLinker provides a quick and extensive enrichment of networks in Cytoscape.